CRAN Package Check Results for Package phangorn

Last updated on 2014-10-30 17:49:22.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.99-9 6.17 135.49 141.66 OK
r-devel-linux-x86_64-debian-gcc 1.99-9 7.42 130.09 137.51 OK
r-devel-linux-x86_64-fedora-clang 1.99-9 299.46 OK
r-devel-linux-x86_64-fedora-gcc 1.99-9 287.69 OK
r-devel-osx-x86_64-clang 1.99-9 242.98 OK
r-devel-windows-ix86+x86_64 1.99-9 23.00 208.00 231.00 OK
r-patched-linux-x86_64 1.99-9 7.35 133.54 140.89 OK
r-patched-solaris-sparc 1.99-9 1095.40 OK --no-vignettes
r-patched-solaris-x86 1.99-9 436.80 OK
r-release-linux-ix86 1.99-8 8.60 171.16 179.75 OK
r-release-linux-x86_64 1.99-9 7.51 134.66 142.17 OK
r-release-osx-x86_64-mavericks 1.99-9 OK
r-release-osx-x86_64-snowleopard 1.99-9 ERROR
r-release-windows-ix86+x86_64 1.99-9 20.00 220.00 240.00 OK
r-oldrel-windows-ix86+x86_64 1.99-9 23.00 221.00 244.00 OK

Check Details

Version: 1.99-9
Check: examples
Result: ERROR
    Running examples in ‘phangorn-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: consensusNet
    > ### Title: Computes a conensusNetwork from a list of trees Computes a
    > ### 'networx' object from a collection of splits.
    > ### Aliases: consensusNet
    > ### Keywords: hplot
    >
    > ### ** Examples
    >
    > data(Laurasiatherian)
    > set.seed(1)
    > bs <- bootstrap.phyDat(Laurasiatherian, FUN = function(x)nj(dist.hamming(x)),
    + bs=100)
    > class(bs) <- 'multiPhylo'
    > cnet = consensusNet(bs, .3)
    > plot(cnet, show.edge.label=TRUE)
    Wed Oct 29 10:16:14 hagal.research.att.com R[17866] <Error>: unknown error code: invalid pixel format
    Wed Oct 29 10:16:14 hagal.research.att.com R[17866] <Error>: kCGErrorFailure: Set a breakpoint @ CGErrorBreakpoint() to catch errors as they are logged.
    X Error of failed request: GLXBadContext
     Major opcode of failed request: 0 ()
     Serial number of failed request: 27
     Current serial number in output stream: 27
Flavor: r-release-osx-x86_64-snowleopard