CRAN Package Check Results for Package oncomodel

Last updated on 2015-07-06 06:46:51.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0 0.72 12.60 13.32 NOTE
r-devel-linux-x86_64-debian-gcc 1.0 0.70 12.81 13.51 NOTE
r-devel-linux-x86_64-fedora-clang 1.0 26.48 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0 24.38 NOTE
r-devel-osx-x86_64-clang 1.0 25.59 NOTE
r-devel-windows-ix86+x86_64 1.0 4.00 21.00 25.00 NOTE
r-patched-linux-x86_64 1.0 0.68 13.01 13.69 NOTE
r-patched-solaris-sparc 1.0 186.10 NOTE
r-patched-solaris-x86 1.0 39.50 NOTE
r-release-linux-x86_64 1.0 0.73 12.99 13.72 NOTE
r-release-osx-x86_64-mavericks 1.0 OK
r-release-windows-ix86+x86_64 1.0 4.00 22.00 26.00 OK
r-oldrel-windows-ix86+x86_64 1.0 5.00 35.00 40.00 OK

Check Details

Version: 1.0
Check: R code for possible problems
Result: NOTE
    Found an obsolete/platform-specific call in the following function:
     ‘comp.freq’
    Found the platform-specific device:
     ‘x11’
    dev.new() is the preferred way to open a new device, in the unlikely
    event one is needed.
    MLparameters: no visible global function definition for ‘optim’
    comp.freq: no visible global function definition for ‘x11’
    comp.freq: no visible global function definition for ‘par’
    comp.freq: no visible global function definition for ‘plot’
    Undefined global functions or variables:
     optim par plot x11
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.0
Check: Rd line widths
Result: NOTE
    Rd file 'oncomodel-package.Rd':
     \examples lines wider than 100 characters:
     #plot.phylog(y.phyl, cnodes =1, clabel.n=0.6, f=0.75, sub="Oncogenetic tree of given aberrations")
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.0
Check: R code for possible problems
Result: NOTE
    Found an obsolete/platform-specific call in the following function:
     ‘comp.freq’
    Found the platform-specific device:
     ‘x11’
    dev.new() is the preferred way to open a new device, in the unlikely
    event one is needed.
Flavors: r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.0
Check: R code for possible problems
Result: NOTE
    MLparameters: no visible global function definition for 'optim'
    comp.freq: no visible global function definition for 'x11'
    comp.freq: no visible global function definition for 'par'
    comp.freq: no visible global function definition for 'plot'
    Undefined global functions or variables:
     optim par plot x11
Flavor: r-devel-windows-ix86+x86_64