CRAN Package Check Results for Package gRc

Last updated on 2015-01-31 08:49:43.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.4-1 0.28 1.53 1.80 ERROR
r-devel-linux-x86_64-debian-gcc 0.4-1 0.27 1.58 1.85 ERROR
r-devel-linux-x86_64-fedora-clang 0.4-1 132.26 NOTE
r-devel-linux-x86_64-fedora-gcc 0.4-1 123.85 NOTE
r-devel-osx-x86_64-clang 0.4-1 113.74 NOTE
r-devel-windows-ix86+x86_64 0.4-1 25.00 70.00 95.00 NOTE
r-patched-linux-x86_64 0.4-1 6.52 54.04 60.56 NOTE
r-patched-solaris-sparc 0.4-1 758.00 NOTE
r-patched-solaris-x86 0.4-1 183.00 NOTE
r-release-linux-ix86 0.4-1 6.94 62.96 69.90 NOTE
r-release-linux-x86_64 0.4-1 6.03 53.70 59.72 NOTE
r-release-osx-x86_64-mavericks 0.4-1 NOTE
r-release-osx-x86_64-snowleopard 0.4-1 NOTE
r-release-windows-ix86+x86_64 0.4-1 20.00 94.00 114.00 NOTE
r-oldrel-windows-ix86+x86_64 0.4-1 20.00 145.00 165.00 NOTE

Memtest notes: valgrind

Check Details

Version: 0.4-1
Check: package dependencies
Result: ERROR
    Packages required but not available: ‘gRbase’ ‘graph’ ‘Rgraphviz’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.4-1
Check: top-level files
Result: NOTE
    Non-standard files/directories found at top level:
     ‘TODO.txt’ ‘Wishlist.txt’ ‘gRc-Ex.R’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.4-1
Check: dependencies in R code
Result: NOTE
    'library' or 'require' call to ‘Rgraphviz’ which was already attached by Depends.
     Please remove these calls from your code.
    Packages in Depends field not imported from:
     ‘Rgraphviz’ ‘gRbase’ ‘graph’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 0.4-1
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     K2theta.rcon K2theta.rcor as.cc.default as.cc.list findKinModel.rcox
     formula2names.NULL formula2names.default formula2names.formula
     formula2names.list formula2string.default formula2string.list
     getIndex.character getIndex.default getIndex.list getScore.rcon
     getScore.rcor listOrder.atom listOrder.cc listOrder.default
     listOrder.list listOrder.numeric names2formula.default
     names2formula.list theta2K.rcon theta2K.rcor toLisp.cc toLisp.default
     toLisp.list print.atom print.cc print.cclist print.colourClass
     print.rcox print.statTable print.summary.rcox summary.rcox plot.rcox
     add1.rcox coef.rcox drop1.rcox update.rcox vcov.rcox fit.rcox
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang

Version: 0.4-1
Check: R code for possible problems
Result: NOTE
    .bootstrapVCOV: no visible global function definition for ‘mvrnorm’
    .buildStandardRepresentation: no visible global function definition for
     ‘unlistPrim’
    .buildStandardRepresentation: no visible global function definition for
     ‘uniquePrim’
    .buildStandardRepresentation: no visible binding for global variable
     ‘names2pairs’
    .buildStandardRepresentation : <anonymous>: no visible global function
     definition for ‘rowSumsPrim’
    .buildStandardRepresentation: no visible global function definition for
     ‘removeRedundant’
    .rconIPM: no visible global function definition for ‘ellK’
    .redundant.index: no visible global function definition for ‘subsetof’
    fitIPSedge: no visible global function definition for ‘ellK’
    fitIPSset: no visible global function definition for ‘ellK’
    fitNR: no visible global function definition for ‘uniquePrim’
    fitNR: no visible global function definition for ‘setdiffPrim’
    fitNR: no visible global function definition for ‘ellK’
    fitNR2: no visible global function definition for ‘uniquePrim’
    fitNR2: no visible global function definition for ‘setdiffPrim’
    fitNR2: no visible global function definition for ‘ellK’
    getedges: no visible global function definition for ‘names2pairs’
    rconIPM: no visible global function definition for ‘ellK’
    rconScoreMatch: no visible global function definition for ‘ellK’
    rcorIPM: no visible global function definition for ‘ellK’
    rcorScoreMatch: no visible global function definition for ‘ellK’
    rcorScoreTheta: no visible global function definition for ‘ellK’
    refitA: no visible global function definition for ‘setdiffPrim’
    scoring: no visible global function definition for ‘ellK’
    scoring: no visible global function definition for ‘unlistPrim’
    stepjoin1: no visible global function definition for ‘fit’
    update.rcox: no visible global function definition for ‘unlistPrim’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 0.4-1
Check: Rd line widths
Result: NOTE
    Rd file 'fitInternal.Rd':
     \usage lines wider than 90 characters:
     scoring (object, K0, control = object$control, maxit=control$maxouter, trace = object$trace)
    
    Rd file 'stepwise.Rd':
     \usage lines wider than 90 characters:
     stepjoin1 (object, scope, type = "ecc", criterion = "aic", steps = 1000, k = 2, alpha = 0.05, stat = "wald", details = 1, trace=0)
     stepsplit1(object, type = "ecc", criterion = "aic", steps = 1000, k = 2, alpha = 0.05, stat = "wald", details = 1, trace=0)
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.4-1
Check: dependencies in R code
Result: NOTE
    'library' or 'require' call to ‘Rgraphviz’ which was already attached by Depends.
     Please remove these calls from your code.
    Packages in Depends field not imported from:
     ‘Rgraphviz’ ‘gRbase’ ‘graph’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.4-1
Check: R code for possible problems
Result: NOTE
    .bootstrapVCOV: no visible global function definition for ‘mvrnorm’
Flavors: r-release-osx-x86_64-snowleopard, r-oldrel-windows-ix86+x86_64